nanozoo/rnaquast:latest

Manifest digest

sha256:8292564f53ac4ca5538126ef2408c6367dbdfa8a257ea32fd58f4339a6a32247

OS/ARCH

linux/amd64

Compressed size

892.71 MB

Last pushed

almost 7 years by nanozoo

Type

Image

Manifest digest

sha256:8292564f53ac4ca5538126ef2408c6367dbdfa8a257ea32fd58f4339a6a32247

Image Layers

1ADD file ... in / 41.98 MB

2/bin/sh -c rm -rf /var/lib/apt/lists/*532 B

3/bin/sh -c set -xe &&856 B

4/bin/sh -c mkdir -p /run/systemd169 B

5CMD ["/bin/bash"]0 B

6ENV VERSION=1.5.20 B

7/bin/sh -c apt-get update &&107.79 MB

8/bin/sh -c pip install --upgrade3.67 MB

9/bin/sh -c wget http://cab.spbu.ru/files/rnaquast/release1.5.2/rnaQUAST-1.5.2.tar.gz5.24 MB

10/bin/sh -c tar -zxvf rnaQUAST-1.5.2.tar.gz;5.17 MB

11/bin/sh -c pip2.7 install gffutils5.19 MB

12/bin/sh -c pip2.7 install matplotlib62.16 MB

13/bin/sh -c pip2.7 install joblib734.3 KB

14/bin/sh -c pip2.7 install biopython5.03 MB

15/bin/sh -c wget http://research-pub.gene.com/gmap/src/gmap-gsnap-2019-06-10.tar.gz4.08 MB

16/bin/sh -c tar -zxvf gmap-gsnap-2019-06-10.tar.gz;4.32 MB

17/bin/sh -c cd gmap-2019-06-10/; ./configure;45.14 MB

18ENV PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/gmap-2019-06-10/src/0 B

19/bin/sh -c wget https://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/LATEST/ncbi-blast+-2.9.0-src.tar.gz22.46 MB

20/bin/sh -c tar -zxvf ncbi-blast+-2.9.0-src.tar.gz;24.55 MB

21/bin/sh -c cd ncbi-blast-2.9.0+-src/c++/; ./configure;555.24 MB

22ENV PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/gmap-2019-06-10/src/:/gmap-2019-06-10/src/0 B

23

ENV PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/gmap-2019-06-10/src/:/gmap-2019-06-10/src/:/rnaQUAST-1.5.2/

0 B

Command

ADD file:a5b5bea2fa5358461649feb68a28ec3e9ec4547164744e8eb7f4112c1969f64f in /