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mgibio/rnaseq:latest

Machine learning & AI
Data science
Manifest digest

sha256:cee67a64fbefb89efb5918ef4ec2c9a4ceed7dfd530f9f8f4b8006a4d40bc632

OS/ARCH

linux/amd64

Compressed size

1.08 GB

Last pushed

over 8 years by mgibio

Type

Image

Manifest digest

sha256:cee67a64fbefb89efb5918ef4ec2c9a4ceed7dfd530f9f8f4b8006a4d40bc632

Image Layers

Image Layers

1ADD file ... in / 40.88 MB
2/bin/sh -c set -xe &&846 B
3/bin/sh -c rm -rf /var/lib/apt/lists/*620 B
4/bin/sh -c sed -i 's/^#\s*\(deb.*universe\)$/\1/g'854 B
5/bin/sh -c mkdir -p /run/systemd171 B
6CMD ["/bin/bash"]0 B
7MAINTAINER Thomas B. Mooney0 B
8LABEL description=Image for tools0 B
9/bin/sh -c apt-get update -y298.49 MB
10ENV HTSLIB_INSTALL_DIR=/opt/htslib0 B
11WORKDIR /tmp0 B
12/bin/sh -c wget https://github.com/samtools/htslib/releases/download/1.3.2/htslib-1.3.2.tar.bz2 &&20.57 MB
13ENV SAMTOOLS_INSTALL_DIR=/opt/samtools0 B
14WORKDIR /tmp0 B
15/bin/sh -c wget https://github.com/samtools/samtools/releases/download/1.3.1/samtools-1.3.1.tar.bz2 &&4.58 MB
16/bin/sh -c mkdir /opt/hisat2/ 26.52 MB
17/bin/sh -c mkdir /opt/sambamba/ 2.83 MB
18/bin/sh -c mkdir /opt/picard/ 19.61 MB
19/bin/sh -c mkdir /opt/stringtie/ 1.39 MB
20/bin/sh -c mkdir -p /opt/flexbar/tmp295.43 KB
21/bin/sh -c pip install --upgrade17.76 MB
22/bin/sh -c ln -sf /usr/share/zoneinfo/America/Chicago344.67 KB
23/bin/sh -c mkdir /opt/kallisto &&11.15 MB
24ARG R_VERSION0 B
25ARG BUILD_DATE0 B
26ENV BUILD_DATE=2017-06-200 B
27ENV R_VERSION=3.4.00 B
28/bin/sh -c apt-get update &&649.68 MB
29ADD file ... in /tmp/ 207 B
30/bin/sh -c R -f /tmp/rpackages.R9.64 MB
31ADD file ... in /usr/src/ 672 B
32ADD file ... in /usr/bin/ 382 B
33/bin/sh -c chmod +x /usr/bin/sambamba_merge382 B
34/bin/sh -c cd / &&1.01 KB

Command

ADD file:a3344b835ea6fdc5692df23826c970403656c6947342e117b2ac1a05956679af in /