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ensemblorg/ensembl-vep:release_109.2

Manifest digest

sha256:eccf21fd18fd3cd53c3b93fe7c3b9f36804bd381a753a02fc4346738d2e473a5

OS/ARCH

linux/amd64

Compressed size

278.3 MB

Last pushed

over 3 years by ensemblorg

Type

Image

Manifest digest

sha256:eccf21fd18fd3cd53c3b93fe7c3b9f36804bd381a753a02fc4346738d2e473a5

Image Layers

Image Layers

1ARG RELEASE0 B
2ARG LAUNCHPAD_BUILD_ARCH0 B
3LABEL org.opencontainers.image.ref.name=ubuntu0 B
4LABEL org.opencontainers.image.version=18.040 B
5ADD file ... in / 24.5 MB
6CMD ["/bin/bash"]0 B
7RUN /bin/sh -c apt-get update100.02 MB
8ENV OPT=/opt/vep0 B
9ENV OPT_SRC=/opt/vep/src0 B
10ENV PERL5LIB_TMP=:/opt/vep/src/ensembl-vep:/opt/vep/src/ensembl-vep/modules0 B
11ENV PERL5LIB=:/opt/vep/src/ensembl-vep:/opt/vep/src/ensembl-vep/modules:/opt/vep/src/bioperl-live0 B
12ENV KENT_SRC=/opt/vep/src/kent-335_base/src0 B
13ENV HTSLIB_DIR=/opt/vep/src/htslib0 B
14ENV MACHTYPE=x86_640 B
15ENV DEPS=/opt/vep/src0 B
16ENV PATH=/opt/vep/src/ensembl-vep:/opt/vep/src/var_c_code:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
17ENV LANG_VAR=en_US.UTF-80 B
18ENV BRANCH=release/1090 B
19RUN /bin/sh -c useradd -r4.36 KB
20USER vep0 B
21COPY /opt/vep/src /opt/vep/src # buildkit71.2 MB
22USER root0 B
23WORKDIR /opt/vep/src/bioperl-ext/Bio/Ext/Align/32 B
24RUN /bin/sh -c perl Makefile.PL1.15 MB
25WORKDIR /opt/vep/src/ensembl-xs32 B
26RUN /bin/sh -c perl Makefile.PL443.31 KB
27WORKDIR /opt/vep/src32 B
28RUN /bin/sh -c ensembl-vep/travisci/build_c.sh &&18.74 MB
29ENV LC_ALL=en_US.UTF-80 B
30ENV LANG=en_US.UTF-80 B
31USER vep0 B
32ENV PERL5LIB=:/opt/vep/src/ensembl-vep:/opt/vep/src/ensembl-vep/modules0 B
33ENV VEP_NO_UPDATE=10 B
34ENV VEP_NO_HTSLIB=10 B
35ENV VEP_NO_PLUGINS=10 B
36ENV VEP_DIR_PLUGINS=/plugins0 B
37ENV VEP_PLUGINSDIR=/plugins0 B
38WORKDIR /plugins136 B
39WORKDIR /opt/vep/src/ensembl-vep32 B
40RUN /bin/sh -c echo >>4.35 MB
41USER root0 B
42ENV PLUGIN_DEPS=https://raw.githubusercontent.com/Ensembl/VEP_plugins/release/109/config0 B
43RUN /bin/sh -c curl -O52.37 MB
44RUN /bin/sh -c curl -O5.11 MB
45RUN /bin/sh -c curl -O430.53 KB
46USER root0 B
47RUN /bin/sh -c ln -s101 B
48USER vep0 B
49WORKDIR /data167 B

Command

 ARG RELEASE