ensemblorg/ensembl-vep-training:release_96

Manifest digest

sha256:7b986a578e27db8b3af14fa04f2c9f1ce06dbd891f32f51113f7f0341d4b6d16

OS/ARCH

linux/amd64

Compressed size

2.45 GB

Last pushed

about 7 years by laurentgil

Type

Image

Manifest digest

sha256:7b986a578e27db8b3af14fa04f2c9f1ce06dbd891f32f51113f7f0341d4b6d16

Image Layers

Image Layers

1ADD file ... in / 27.52 MB

2/bin/sh -c set -xe &&844 B

3/bin/sh -c rm -rf /var/lib/apt/lists/*0 B

4/bin/sh -c mkdir -p /run/systemd164 B

5CMD ["/bin/bash"]0 B

6/bin/sh -c apt-get update &&92.9 MB

7ENV OPT=/opt/vep0 B

8ENV OPT_SRC=/opt/vep/src0 B

9ENV PERL5LIB_TMP=:/opt/vep/src/ensembl-vep:/opt/vep/src/ensembl-vep/modules0 B

10ENV PERL5LIB=:/opt/vep/src/ensembl-vep:/opt/vep/src/ensembl-vep/modules:/opt/vep/src/bioperl-live0 B

11ENV KENT_SRC=/opt/vep/src/kent-335_base/src0 B

12ENV HTSLIB_DIR=/opt/vep/src/htslib0 B

13ENV MACHTYPE=x86_640 B

14ENV DEPS=/opt/vep/src0 B

15ENV PATH=/opt/vep/src/ensembl-vep:/opt/vep/src/var_c_code:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B

16ENV LANG_VAR=en_US.UTF-80 B

17/bin/sh -c useradd -r -m4.32 KB

18USER vep0 B

19COPY --chown=vep:vepdir:b8b862ce426c43ad7106fac94022ee32f217274d0f34217c2670e44ba4240e84 in /opt/vep/src 57.61 MB

20USER root0 B

21WORKDIR /opt/vep/src/bioperl-ext/Bio/Ext/Align/0 B

22/bin/sh -c perl Makefile.PL &&1.15 MB

23WORKDIR /opt/vep/src/ensembl-xs0 B

24/bin/sh -c perl Makefile.PL &&443.15 KB

25WORKDIR /opt/vep/src0 B

26/bin/sh -c ensembl-vep/travisci/build_c.sh && 50.5 MB

27ENV LC_ALL=en_US.UTF-80 B

28ENV LANG=en_US.UTF-80 B

29USER vep0 B

30ENV PERL5LIB=:/opt/vep/src/ensembl-vep:/opt/vep/src/ensembl-vep/modules0 B

31WORKDIR /opt/vep/src/ensembl-vep0 B

32/bin/sh -c echo >> $OPT/.profile4.09 MB

33ENV OPT_SRC_CACHE=/opt/vep/src/cache0 B

34ENV FASTA_FILE=Homo_sapiens.GRCh38.dna.chromosome.1.fa0 B

35ENV VEP_RELEASE=960 B

36WORKDIR /opt/vep/src0 B

37COPY --chown=vep:vepdir:ef4a0b1b755a36603d7bf12bce0ec7b7505dfc405397f521db9a3f4cc9dde339 in /opt/vep/src 1.69 GB

38/bin/sh -c gunzip "cache/homo_sapiens/$VEP_RELEASE""_GRCh38/$FASTA_FILE.gz" &&546.85 MB

39WORKDIR /opt/vep/src/ensembl-vep0 B

Command

ADD file:1f4fdc61e133d2f9019d8a06a8126fef0ed4339cb25fda73446393fe8da197c5 in /