ensemblorg/ensembl-vep-training:release_95

Manifest digest

sha256:1cac419a9bdb4e1b60b6ca83148e84de4aeb0fb0c3808c81c2b7820688e7b77e

OS/ARCH

linux/amd64

Compressed size

3.17 GB

Last pushed

over 7 years by laurentgil

Type

Image

Manifest digest

sha256:1cac419a9bdb4e1b60b6ca83148e84de4aeb0fb0c3808c81c2b7820688e7b77e

Image Layers

Image Layers

1ADD file ... in / 41.51 MB

2/bin/sh -c set -xe &&847 B

3/bin/sh -c rm -rf /var/lib/apt/lists/*526 B

4/bin/sh -c mkdir -p /run/systemd168 B

5CMD ["/bin/bash"]0 B

6/bin/sh -c apt-get update &&136.51 MB

7ENV OPT=/opt/vep0 B

8ENV OPT_SRC=/opt/vep/src0 B

9ENV PERL5LIB=:/opt/vep/src/bioperl-live0 B

10ENV KENT_SRC=/opt/vep/src/kent-335_base/src0 B

11ENV HTSLIB_DIR=/opt/vep/src/htslib0 B

12ENV MACHTYPE=x86_640 B

13ENV DEPS=/opt/vep/src0 B

14ENV PATH=/opt/vep/src/ensembl-vep:/opt/vep/src/var_c_code:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B

15ENV LANG_VAR=en_US.UTF-80 B

16/bin/sh -c useradd -r -m4.4 KB

17USER vep0 B

18COPY --chown=vep:vepdir:cb611f1bc2e9a19ebd9c414358eb61b35b7e8ce625317a6525a4557b3e42e023 in /opt/vep/src 58.15 MB

19USER root0 B

20WORKDIR /opt/vep/src/bioperl-ext/Bio/Ext/Align/0 B

21/bin/sh -c perl Makefile.PL &&1.11 MB

22WORKDIR /opt/vep/src/ensembl-xs0 B

23/bin/sh -c perl Makefile.PL &&418.24 KB

24WORKDIR /opt/vep/src0 B

25/bin/sh -c ensembl-vep/travisci/build_c.sh && 49.68 MB

26ENV LC_ALL=en_US.UTF-80 B

27ENV LANG=en_US.UTF-80 B

28USER vep0 B

29WORKDIR /opt/vep/src/ensembl-vep0 B

30/bin/sh -c echo >> $OPT/.profile4.05 MB

31ENV OPT_SRC_CACHE=/opt/vep/src/cache0 B

32ENV FASTA_FILE=Homo_sapiens.GRCh38.dna.chromosome.1.fa0 B

33ENV VEP_RELEASE=950 B

34WORKDIR /opt/vep/src0 B

35COPY --chown=vep:vepdir:f3bde38c710d8bc5afa0c6cc8dc46e5b0507fe444683dee7f827ab8c1231940c in /opt/vep/src 2.29 GB

36/bin/sh -c gunzip "cache/homo_sapiens/$VEP_RELEASE""_GRCh38/$FASTA_FILE.gz" &&602.25 MB

37WORKDIR /opt/vep/src/ensembl-vep0 B

Command

ADD file:916a45030dee881bbc8bbabf8bcfcc8828c29ce1c318000950bbe84c57f9df73 in /